I'd like the root environment of conda to copy all of the packages in another environment. How can this be done?
There are options to copy dependency names/urls/versions to files.
Recommendation
Normally it is safer to work from a new environment rather than changing root
. However, consider backing up your existing environments before attempting changes. Verify the desired outcome by testing these commands in a demo environment. To backup your root
env for example:
λ conda activate root
λ conda env export > environment_root.yml
λ conda list --explicit > spec_file_root.txt
Options
Option 1 - YAML file
Within the second environment (e.g. myenv
), export names+ to a yaml file:
λ activate myenv
λ conda env export > environment.yml
then update the first environment+ (e.g. root
) with the yaml file:
λ conda env update --name root --file environment.yml
Option 2 - Cloning an environment
Use the --clone
flag to clone environments (see @DevC's post):
λ conda create --name myclone --clone root
This basically creates a direct copy of an environment.
Option 3 - Spec file
Make a spec-file++ to append dependencies from an env (see @Ormetrom):
λ activate myenv
λ conda list --explicit > spec_file.txt
λ conda install --name root --file spec_file.txt
Alternatively, replicate a new environment (recommended):
λ conda create --name myenv2 --file spec_file.txt
See Also
conda env
for more details on the env sub-commands.activate
(Windows) and source activate
(Linux/Mac OS). Newer versions of conda can use conda activate
(this may require some setup with your shell configuration via conda init
).conda env
Extras
There appears to be an undocumented conda run
option to help execute commands in specific environments.
# New command
λ conda run --name myenv conda list --explicit > spec_file.txt
The latter command is effective at running commands in environments without the activation/deactivation steps. See the equivalent command below:
# Equivalent
λ activate myenv
λ conda list --explicit > spec_file.txt
λ deactivate
Note, this is likely an experimental feature, so this may not be appropriate in production until official adoption into the public API.
+Conda docs have changed since the original post; links updated. ++Spec-files only work with environments created on the same OS. Unlike the first two options, spec-files only capture links to conda dependencies; pip dependencies are not included.
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